Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references mouse.
funcbase.mouse
Local identifiers in FuncBase Mouse should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from FuncBase Mouse should match
this regular expression:
^funcbase\.mouse:\d+$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
FUNCBASE.MOUSE
|
|
Identifiers.org
|
miriam |
funcbase.mouse
|
|
N2T
|
n2t |
funcbase.mouse
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 1351341 is used to demonstrate the providers
available for FuncBase Mouse. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| FuncBase Mouse | funcbase.mouse |
http://func.mshri.on.ca/mouse/genes/list_functional_scores/1351341 |
| Bioregistry | bioregistry |
https://bioregistry.io/funcbase.mouse:1351341 |
| Identifiers.org | miriam |
https://identifiers.org/funcbase.mouse:1351341 |
| Name-to-Thing | n2t |
https://n2t.net/funcbase.mouse:1351341 |