Computational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. This collection references mouse.

Prefix
funcbase.mouse
Links
Homepage
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in FuncBase Mouse should match this regular expression:
^\d+$

Example Local Unique Identifier
1351341   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from FuncBase Mouse should match this regular expression:
^funcbase\.mouse:\d+$

Example CURIE
funcbase.mouse:1351341
Contacts
Contact
Missing Contact
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext FUNCBASE.MOUSE
Identifiers.org Identifiers.org logo miriam funcbase.mouse
N2T Name-to-Thing logo n2t funcbase.mouse
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1351341 is used to demonstrate the providers available for FuncBase Mouse. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
FuncBase Mouse funcbase.mouse http://func.mshri.on.ca/mouse/genes/list_functional_scores/1351341
Bioregistry bioregistry https://bioregistry.io/funcbase.mouse:1351341
Identifiers.org miriam https://identifiers.org/funcbase.mouse:1351341
Name-to-Thing n2t https://n2t.net/funcbase.mouse:1351341