Marker report for marker HGVM15354 (accession dbSNP:rs8580)
GWAS Central marker ID |
HGVM15354 |
Marker accession ID |
rs8580
|
Variation type |
SNP |
Observed alleles |
|
5' upstream 30bp | (allele seq) | 3' downstream 30bp |
ATGCTCCCCAACCTGGATGTCGAGATGCAC(C)CGCTACAAGGAAACATGGAATGTATGAGTG | ATGCTCCCCAACCTGGATGTCGAGATGCAC(A)CGCTACAAGGAAACATGGAATGTATGAGTG |
|
Genomic location |
chr7:44,620,836..44,620,836
(view in genome browser: Ensembl
|
UCSC)
|
Mapped gene |
TMED4[exonic] |
Marker status and Revision History |
WARNING: this marker is NOT active in the source database
Date of change |
Change trigger |
Change type |
Replaced by |
Comment |
13/05/2008 |
b129 |
BadFlanks |
N/A |
Strand -1
Overall Alignment Score: 44
oldSeq/1-50 -------------CCTCTCTTCGCTGGTGGCAAACGCGGTGCATCTCGACATCCAGGTTGGGG-----
newSeq/1-60 CACTCATACATTCCATGT-TTC-CTTGT----A--GCGGTGCATCTCGACATCCAGGTTGGGGAGCAT
|
13/05/2008 |
b129 |
AllelesDeleted |
N/A |
Alleles deleted: G/T |
13/05/2008 |
b129 |
AllelesAdded |
N/A |
Alleles added: A/C |
|
Cross-references |
None available |
Links |
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