appears_in: []
banana: PW
contact:
  email: gthayman@mcw.edu
  github: gthayman
  name: G. Thomas Hayman
  orcid: 0000-0002-9553-7227
depends_on: []
deprecated: false
description: 'The Pathway Ontology captures information on biological networks, the
  relationships between netweorks and the alterations or malfunctioning of such networks
  within a hierarchical structure. The five main branches of the ontology are: classic
  metabolic pathways, regulatory, signaling, drug, and disease pathwaysfor complex
  human conditions.'
download_obo: https://download.rgd.mcw.edu/pub/data_release/ontology_obo_files/pathway/pathway.obo
download_owl: http://purl.obolibrary.org/obo/pw.owl
example: '0000423'
example_extras: []
homepage: http://rgd.mcw.edu/rgdweb/ontology/search.html
keywords:
- biological regulation
- disease
- drug
- drug metabolism
- enzymatic reaction
- human
- life science
- molecular entity
- obo
- ontology
- pathway
- signaling
license: CC-BY-4.0
logo: http://rgd.mcw.edu/common/images/rgd_LOGO_blue_rgd.gif
mappings:
  aberowl: PW
  biocontext: PW
  bioportal: PW
  fairsharing: FAIRsharing.f73xhd
  miriam: pw
  n2t: pw
  obofoundry: pw
  ols: pw
  ontobee: PW
  prefixcommons: pw
  wikidata: P7333
  wikidata.entity: Q28864280
name: Pathway ontology
namespace_in_lui: true
pattern: ^\d{7}$
preferred_prefix: PW
prefix: pw
providers:
- code: ''
  description: Pathway Ontology at Rat Genome Database
  homepage: http://rgd.mcw.edu/rgdweb/ontology/search.html
  name: Pathway Ontology at Rat Genome Database
  uri_format: http://rgd.mcw.edu/rgdweb/ontology/annot.html?acc_id=PW:$1
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/pw:$1
- code: miriam_obo_legacy
  description: An old URI style for MIRIAM
  homepage: https://identifiers.org/
  name: MIRIAM OBO Legacy
  uri_format: http://identifiers.org/obo.pw/PW:$1
publications:
- doi: 10.1186/s40246-014-0017-8
  pmc: PMC4191248
  pubmed: '25265995'
  title: 'Disease pathways at the Rat Genome Database Pathway Portal: genes in context-a
    network approach to understanding the molecular mechanisms of disease'
  year: 2014
- doi: 10.1186/2041-1480-5-7
  pmc: PMC3922094
  pubmed: '24499703'
  title: The pathway ontology - updates and applications
  year: 2014
- doi: 10.1093/database/bar010
  pmc: PMC3072770
  pubmed: '21478484'
  title: The Rat Genome Database pathway portal
  year: 2011
rdf_uri_format: http://purl.obolibrary.org/obo/PW_$1
repository: https://github.com/rat-genome-database/PW-Pathway-Ontology
synonyms: []
twitter: ratgenome
uri_format: http://purl.obolibrary.org/obo/PW_$1
version: '7.95'
