appears_in: [] depends_on: [] deprecated: false description: PomBase is a model organism database established to provide access to molecular data and biological information for the fission yeast Schizosaccharomyces pombe. It encompasses annotation of genomic sequence and features, comprehensive manual literature curation and genome-wide data sets. example: SPCC13B11.01 homepage: https://www.pombase.org/ keywords: - life science mappings: biocontext: PomBase biolink: PomBase fairsharing: FAIRsharing.8jsya3 go: PomBase integbio: nbdc00332 miriam: pombase n2t: pombase ncbi: PomBase prefixcommons: pombase re3data: r3d100011478 uniprot: DB-0031 wikidata: P6245 name: PomBase namespace_in_lui: false pattern: ^S\w+(\.)?\w+(\.)?$ preferred_prefix: pombase prefix: pombase providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/pombase:$1 publications: - doi: 10.1093/nar/gky961 pmc: PMC6324063 pubmed: '30321395' title: 'PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information' year: 2019 - doi: 10.1186/s12915-016-0276-z pmc: PMC4918006 pubmed: '27334346' title: 'Model organism databases: essential resources that need the support of both funders and users' year: 2016 - doi: 10.1093/nar/gku1040 pmc: PMC4383888 pubmed: '25361970' title: 'PomBase 2015: updates to the fission yeast database' year: 2014 - doi: 10.1186/1471-2105-15-155 pmc: PMC4039540 pubmed: '24885854' title: A method for increasing expressivity of Gene Ontology annotations using a compositional approach year: 2014 - doi: 10.1093/bioinformatics/btu103 pmc: PMC4058955 pubmed: '24574118' title: 'Canto: an online tool for community literature curation' year: 2014 - doi: 10.1093/bioinformatics/btt266 pmc: PMC3694669 pubmed: '23658422' title: 'FYPO: the fission yeast phenotype ontology' year: 2013 - doi: 10.1093/nar/gks1050 pmc: PMC3531070 pubmed: '23161678' title: Gene Ontology annotations and resources year: 2012 - doi: 10.1093/nar/gkr1028 pmc: PMC3245151 pubmed: '22102568' title: 'The Gene Ontology: enhancements for 2011' year: 2011 - doi: 10.1093/nar/gkr853 pmc: PMC3245111 pubmed: '22039153' title: 'PomBase: a comprehensive online resource for fission yeast' year: 2011 synonyms: - PomBase uri_format: https://www.pombase.org/gene/$1