appears_in: []
contact:
  email: gaog@mail.cbi.pku.edu.cn
  github: gao-ge
  name: Ge Gao
  orcid: 0000-0001-6470-8815
depends_on: []
deprecated: false
description: The Plant TF database (PlantTFDB) systematically identifies transcription
  factors for plant species. It includes annotation for identified TFs, including
  information on expression, regulation, interaction, conserved elements, phenotype
  information. It also provides curated descriptions and cross-references to other
  life science databases, as well as identifying evolutionary relationship among identified
  factors.
example: Ath_AT1G01030.1
homepage: http://planttfdb.cbi.pku.edu.cn
keywords:
- dna
- gene
- life science
- protein
- regulation
- rna
- small molecule
mappings:
  biocontext: PLANTTFDB
  fairsharing: FAIRsharing.ex3fqk
  miriam: planttfdb
  n2t: planttfdb
  pathguide: '497'
  prefixcommons: planttfdb
  re3data: r3d100011301
name: Plant Transcription Factor Database
namespace_in_lui: false
pattern: ^[A-Z][a-z]{2}_([A-Za-z]{3}[0-9]{6})|([A-Za-z0-9\._\-#]*)$
preferred_prefix: planttfdb
prefix: planttfdb
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/planttfdb:$1
publications:
- doi: 10.1093/nar/gkw982
  pmc: PMC5210657
  pubmed: '27924042'
  title: 'PlantTFDB 4.0: toward a central hub for transcription factors and regulatory
    interactions in plants'
  year: 2016
- doi: 10.1093/molbev/msv058
  pmc: PMC4476157
  pubmed: '25750178'
  title: An Arabidopsis Transcriptional Regulatory Map Reveals Distinct Functional
    and Evolutionary Features of Novel Transcription Factors
  year: 2015
- doi: 10.1093/nar/gkt1016
  pmc: PMC3965000
  pubmed: '24174544'
  title: 'PlantTFDB 3.0: a portal for the functional and evolutionary study of plant
    transcription factors'
  year: 2013
synonyms: []
uri_format: http://planttfdb.cbi.pku.edu.cn/tf.php?uid=$1
