appears_in:
- agro
- aism
- cdno
- cl
- colao
- ecocore
- ecto
- fovt
- gallont
- lepao
- mco
- ms
- pcl
- pco
- phipo
- planp
- proco
- rbo
- uberon
- xpo
- zp
banana: PATO
contact:
  email: g.gkoutos@gmail.com
  github: gkoutos
  name: George Gkoutos
  orcid: 0000-0002-2061-091X
depends_on: []
deprecated: false
description: PATO is an ontology of phenotypic qualities, intended for use in a number
  of applications, primarily defining composite phenotypes and phenotype  annotation.
download_json: http://purl.obolibrary.org/obo/pato.json
download_obo: http://purl.obolibrary.org/obo/pato.obo
download_owl: http://purl.obolibrary.org/obo/pato.owl
example: 0001998
homepage: https://github.com/pato-ontology/pato/
keywords:
- biodiversity
- biology
- obo
- ontology
- phenotype
- quality
license: CC-BY-3.0
mappings:
  aberowl: PATO
  agroportal: PATO
  biocontext: PATO
  bioportal: PATO
  fairsharing: FAIRsharing.ezwdhz
  go: PATO
  miriam: pato
  n2t: pato
  obofoundry: pato
  ols: pato
  ontobee: PATO
  prefixcommons: pato
name: Phenotype And Trait Ontology
namespace_in_lui: true
pattern: ^\d{7}$
preferred_prefix: PATO
prefix: pato
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/pato:$1
- code: purl
  description: Legacy PURLs found in OAE
  homepage: http://purl.org/obo/owl/
  name: Legacy PURL
  uri_format: http://purl.org/obo/owl/PATO#PATO_$1
publications:
- doi: 10.1093/bib/bbx035
  pmc: PMC6169674
  pubmed: '28387809'
  title: 'The anatomy of phenotype ontologies: principles, properties and applications'
  year: 2018
- doi: 10.1186/gb-2010-11-1-r2
  pmc: PMC2847714
  pubmed: '20064205'
  title: Integrating phenotype ontologies across multiple species
  year: 2010
- doi: 10.1186/gb-2004-6-1-r8
  pmc: PMC549069
  pubmed: '15642100'
  title: Using ontologies to describe mouse phenotypes
  year: 2004
rdf_uri_format: http://purl.obolibrary.org/obo/PATO_$1
repository: https://github.com/pato-ontology/pato
synonyms: []
uri_format: http://purl.obolibrary.org/obo/PATO_$1
version: '2024-03-28'
