appears_in: [] contact: email: pkarp@ai.sri.com github: pkarp111 name: Peter Karp orcid: 0000-0002-5876-6418 depends_on: [] deprecated: false description: MetaCyc is a curated database of experimentally elucidated metabolic pathways from all domains of life. MetaCyc contains 2526 pathways from 2844 different organisms. MetaCyc contains pathways involved in both primary and secondary metabolism, as well as associated metabolites, reactions, enzymes, and genes. The goal of MetaCyc is to catalog the universe of metabolism by storing a representative sample of each experimentally elucidated pathway. example: CPD-10330 homepage: https://metacyc.org keywords: - life science - metabolomics - systems biology mappings: biocontext: METACYC.COMPOUND biolink: MetaCyc fairsharing: FAIRsharing.yytevr go: MetaCyc integbio: nbdc00907 miriam: metacyc.compound n2t: metacyc.compound pathguide: '10' re3data: r3d100011294 name: Metabolic Encyclopedia of metabolic and other pathways namespace_in_lui: false pattern: ^[A-Za-z0-9+_.%-:]+$ preferred_prefix: metacyc.compound prefix: metacyc.compound providers: [] publications: - doi: 10.1093/nar/gkv1164 pmc: PMC4702838 pubmed: '26527732' title: The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases year: 2015 - doi: 10.1093/nar/gkt1103 pmc: PMC3964957 pubmed: '24225315' title: The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases year: 2013 - doi: 10.1093/nar/gkr1014 pmc: PMC3245006 pubmed: '22102576' title: The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases year: 2011 synonyms: - MetaCyc twitter: BioCyc uri_format: https://metacyc.org/compound?orgid=META&id=$1