appears_in: []
contact:
  email: duret@biomserv.univ-lyon1.fr
  name: Laurent Duret
  orcid: 0000-0003-2836-3463
depends_on: []
deprecated: false
description: HOVERGEN is a database of homologous vertebrate genes that allows one
  to select sets of homologous genes among vertebrate species, and to visualize multiple
  alignments and phylogenetic trees.
example: HBG004341
homepage: https://pbil.univ-lyon1.fr/databases/hovergen.php
keywords:
- dna
- gene
- life science
- protein
mappings:
  biocontext: HOVERGEN
  fairsharing: FAIRsharing.dg1f0e
  integbio: nbdc00284
  miriam: hovergen
  n2t: hovergen
  prefixcommons: hovergen
name: Homologous Vertebrate Genes Database
namespace_in_lui: false
pattern: ^HBG\d+$
preferred_prefix: hovergen
prefix: hovergen
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/hovergen:$1
publications:
- doi: 10.1093/bioinformatics/bti325
  pubmed: '15713731'
  title: 'Tree pattern matching in phylogenetic trees: automatic search for orthologs
    or paralogs in homologous gene sequence databases'
  year: 2005
synonyms: []
uri_format: http://pbil.univ-lyon1.fr/cgi-bin/view-tree.pl?query=$1&db=HOVERGEN
