appears_in: [] banana_peel: _ depends_on: [] deprecated: false description: The Gene Expression Omnibus (GEO) is a gene expression repository providing a curated, online resource for gene expression data browsing, query and retrieval. example: GDS1234 homepage: https://www.ncbi.nlm.nih.gov/geo/ keywords: - comparative genomics - epigenomics - gene expression - genome - genomics - life science - omics - phenomics - transcriptomics mappings: cellosaurus: GEO edam: '1147' fairsharing: FAIRsharing.5hc8vt go: GEO integbio: nbdc00080 miriam: geo n2t: geo prefixcommons: geo re3data: r3d100010283 name: NCBI Gene Expression Omnibus namespace_in_lui: false pattern: ^G(PL|SM|SE|DS)\d+$ preferred_prefix: geo prefix: geo providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/geo:$1 publications: - doi: 10.1093/nar/gks1193 pmc: PMC3531084 pubmed: '23193258' title: 'NCBI GEO: archive for functional genomics data sets--update' year: 2012 - doi: 10.1038/nbt1206-1471 pmc: PMC2270403 pubmed: '17160034' title: NCBI GEO standards and services for microarray data year: 2006 - doi: 10.1093/nar/30.1.207 pmc: PMC99122 pubmed: '11752295' title: 'Gene Expression Omnibus: NCBI gene expression and hybridization array data repository' year: 2002 - doi: 10.1038/35001676 pubmed: '10693778' title: One-stop shop for microarray data year: 2000 - doi: 10.5281/zenodo.5706412 title: 'MINSEQE: Minimum Information about a high-throughput Nucleotide SeQuencing Experiment - a proposal for standards in functional genomic data reporting' year: 2012 synonyms: [] uri_format: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=$1