appears_in: []
depends_on: []
deprecated: false
description: The DBD (transcription factor database) provides genome-wide transcription
  factor predictions for organisms across the tree of life. The prediction method
  identifies sequence-specific DNA-binding transcription factors through homology
  using profile hidden Markov models (HMMs) of domains from Pfam and SUPERFAMILY.
  It does not include basal transcription factors or chromatin-associated proteins.
example: '0045310'
homepage: http://www.transcriptionfactor.org/
keywords:
- genome
- regulation
mappings:
  biocontext: DBD
  edam: '2716'
  miriam: dbd
  n2t: dbd
  pathguide: '496'
  prefixcommons: dbd
name: Transcription Factor Database
namespace_in_lui: false
pattern: ^\d+$
preferred_prefix: dbd
prefix: dbd
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/dbd:$1
publications: []
synonyms: []
uri_format: http://www.transcriptionfactor.org/index.cgi?Search/Domain+domain:$1+cat:DBD
