{"prefix":"crisprdb","name":"CRISPRdb","description":"Repeated CRISPR (\"clustered regularly interspaced short palindromic repeats\") elements found in archaebacteria and eubacteria are believed to defend against viral infection, potentially targeting invading DNA for degradation. CRISPRdb is a database that stores information on CRISPRs that are automatically extracted from newly released genome sequence data.","pattern":"^[0-9]+$","uri_format":"http://crispr.i2bc.paris-saclay.fr/cgi-bin/crispr/SpecieProperties_db.cgi?Taxon_id[]=$1","providers":[],"homepage":"http://crispr.i2bc.paris-saclay.fr/","example":"551115","example_extras":[],"deprecated":false,"mappings":{"biocontext":"CRISPRDB","integbio":"nbdc02213","miriam":"crisprdb","n2t":"crisprdb"},"synonyms":[],"keywords":["genome/gene","sequence"],"publications":[{"pubmed":"18442988","doi":"10.1093/nar/gkn228","pmc":"PMC2447796","title":"CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats","year":2008},{"pubmed":"17537822","doi":"10.1093/nar/gkm360","pmc":"PMC1933234","title":"CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats","year":2007},{"pubmed":"17521438","doi":"10.1186/1471-2105-8-172","pmc":"PMC1892036","title":"The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats","year":2007}],"appears_in":[],"depends_on":[],"namespace_in_lui":false,"preferred_prefix":"crisprdb"}