appears_in: []
contact:
  email: rnakato@iqb.u-tokyo.ac.jp
  name: Ryuichiro Nakato
  orcid: 0000-0003-3019-5817
contributor:
  email: maaya.m466@gmail.com
  github: maayamanoj466
  name: Maaya Manoj
  orcid: 0009-0000-6974-6386
depends_on: []
deprecated: false
description: Contains identifiers for genes that are part of cohesin regulated CRMs
  (cis-regulatory modules) from CohesinDB. CohesinDB includes 2043 epigenomics, transcriptomics
  and 3D genomics datasets from 530 studies involving 176 cell types. Each identifier
  represents a single cohesin-related CRM. Each cohesin object is annotated with locus,
  cell type, classification, function, 3D genomics and cis-regulatory information.
example: CDBG00009781
example_extras: []
github_request_issue: 1646
homepage: https://cohesindb.iqb.u-tokyo.ac.jp
keywords:
- gene
mappings: {}
name: CohesinDB gene
pattern: ^CDBG000\d{5}$
preferred_prefix: cohesindb.gene
prefix: cohesindb.gene
providers: []
publications:
- doi: 10.1093/nar/gkac795
  pmc: PMC9825609
  pubmed: '36162821'
  title: 'CohesinDB: a comprehensive database for decoding cohesin-related epigenomes,
    3D genomes and transcriptomes in human cells'
  year: 2023
reviewer:
  email: cthoyt@gmail.com
  github: cthoyt
  name: Charles Tapley Hoyt
  orcid: 0000-0003-4423-4370
synonyms: []
uri_format: https://cohesindb.iqb.u-tokyo.ac.jp/browsegene/eachgene/$1
