appears_in: []
contact:
  email: gsherloc@stanford.edu
  name: Gavin Sherlock
  orcid: 0000-0002-1692-4983
depends_on: []
deprecated: false
description: The Candida Genome Database (CGD) provides access to genomic sequence
  data and manually curated functional information about genes and proteins of the
  human pathogen Candida albicans. It collects gene names and aliases, and assigns
  gene ontology terms to describe the molecular function, biological process, and
  subcellular localization of gene products.
example: CAL0003079
example_extras: []
homepage: http://www.candidagenome.org/
keywords:
- eukaryotic
- genome
- life science
- nucleotide
mappings:
  biocontext: CGD
  fairsharing: FAIRsharing.j7j53
  go: CGD
  integbio: nbdc00391
  miriam: cgd
  n2t: cgd
  ncbi: CGD
  prefixcommons: cgd
  re3data: r3d100010617
  uniprot: DB-0126
name: Candida Genome Database
namespace_in_lui: false
pattern: ^CAL\d{7}$
preferred_prefix: cgd
prefix: cgd
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/cgd:$1
publications:
- doi: 10.1093/nar/gkw924
  pmc: PMC5210628
  pubmed: '27738138'
  title: 'The Candida Genome Database (CGD): incorporation of Assembly 22, systematic
    identifiers and visualization of high throughput sequencing data'
  year: 2016
- doi: 10.1093/nar/gkr945
  pmc: PMC3245171
  pubmed: '22064862'
  title: 'The Candida genome database incorporates multiple Candida species: multispecies
    search and analysis tools with curated gene and protein information for Candida
    albicans and Candida glabrata'
  year: 2011
- doi: 10.1093/nar/gki003
  pmc: PMC539957
  pubmed: '15608216'
  title: The Candida Genome Database (CGD), a community resource for Candida albicans
    gene and protein information
  year: 2005
synonyms: []
uri_format: http://www.candidagenome.org/cgi-bin/locus.pl?dbid=$1
