appears_in: []
depends_on: []
deprecated: false
description: AphidBase is a centralized bioinformatic resource that was developed
  to facilitate community annotation of the pea aphid genome by the International
  Aphid Genomics Consortium (IAGC). The AphidBase Information System was designed
  to organize and distribute genomic data and annotations for a large international
  community. This collection references the transcript report, which describes genomic
  location, sequence and exon information.
example: ACYPI000159
homepage: http://www.aphidbase.com/aphidbase
keywords:
- genome
mappings:
  biocontext: APHIDBASE.TRANSCRIPT
  miriam: aphidbase.transcript
  n2t: aphidbase.transcript
  prefixcommons: aphidbase
name: AphidBase Transcript
namespace_in_lui: false
pattern: ^ACYPI\d{6}(-RA)?$
preferred_prefix: aphidbase.transcript
prefix: aphidbase.transcript
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/aphidbase:$1
publications:
- doi: 10.1111/j.1365-2583.2009.00930.x
  pmc: PMC4372297
  pubmed: '20482635'
  title: 'AphidBase: a centralized bioinformatic resource for annotation of the pea
    aphid genome'
  year: 2010
synonyms: []
uri_format: http://bipaa.genouest.org/apps/grs-2.3/grs?reportID=aphidbase_transcript_report&objectID=$1
