appears_in: [] depends_on: [] deprecated: false description: AmoebaDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera. example: EDI_244000 homepage: http://amoebadb.org/amoeba/ keywords: - functional genomics - genomics - model organism mappings: biocontext: AMOEBADB fairsharing: FAIRsharing.swbypy integbio: nbdc01207 miriam: amoebadb n2t: amoebadb prefixcommons: amoebadb re3data: r3d100012457 name: AmoebaDB namespace_in_lui: false pattern: ^EDI_\d+$ preferred_prefix: amoebadb prefix: amoebadb providers: - code: bio2rdf description: Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the largest network of Linked Data for the Life Sciences. Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked Data from a diverse set of heterogeneously formatted sources obtained from multiple data providers. homepage: https://bio2rdf.org name: Bio2RDF uri_format: http://bio2rdf.org/amoebadb:$1 publications: - doi: 10.1093/nar/gkp941 pmc: PMC2808945 pubmed: '19914931' title: 'EuPathDB: a portal to eukaryotic pathogen databases' year: 2009 synonyms: [] twitter: eupathdb uri_format: https://amoebadb.org/amoeba/app/record/gene/$1